Blog Archive

December 2017

• Introducing spark-bam

August 2017

• Benchmarking MHCflurry, take 2

June 2017

• Introducing SurvivalStan

May 2017

• Kubeface: distributed computing in Python on Google Container Engine
• Benchmarking MHCflurry

April 2017

• Building Scala Projects: Maven vs. SBT

November 2016

• Introducing Cohorts
• Graph visualizations of MHC alleles

February 2016

• Extending Gene Set Enrichment Analysis with Cancer Immunology Collections

December 2015

• Our Experiences with Flow

November 2015

• Ketrew Industries Two Hundred

October 2015

• SVG→Canvas, the pileup.js Journey

September 2015

• Testing Oml

August 2015

• Introducing Oml, a Small OCaml Library for Numerical Computing

July 2015

• Spree: A Live-Updating Web UI for Spark
• Bundling and Distributing Complex ES6 Libraries in an ES5 World

June 2015

• Complete Visual Testing and Continuous Integration with Seltest
• Introducing pileup.js, a Browser-based Genome Viewer
• Bioinformatics Workflows on a Hadoop Cluster

March 2015

• Creating OCaml Code Coverage Reports for Ketrew

February 2015

• Monitoring Spark with Graphite and Grafana
• Testing React Web Apps with Mocha (Part 2)
• Testing React Web Apps with Mocha
• Methods and Coming Advances in Guacamole
• Exploring the Genome with Ensembl and Python

January 2015

• Introducing Guacamole 0.0.0
• Introducing CycleDash 0.0.0
• Faster Pileup Loading with BAI Indices
• Introducing Ketrew 0.0.0

December 2014

• Streaming from HDFS with igv-httpfs