let default =
{
name = "default";
rna_gene_fpkm_tracking_file = None;
rna_min_gene_expression = 4.0;
rna_transcript_fpkm_tracking_file = None;
rna_min_transcript_expression = 1.5;
rna_transcript_fkpm_gtf_file = None;
mhc_epitope_lengths = [8; 9; 10; 11];
only_novel_epitopes = false;
ic50_cutoff = 500.0;
percentile_cutoff = 2.0;
padding_around_mutation = None;
self_filter_directory = None;
skip_variant_errors = false;
parameters = []
}