sig
type t = {
name : string;
use_dbsnp : bool;
use_cosmic : bool;
additional_arguments : string list;
}
val create :
?use_dbsnp:bool ->
?use_cosmic:bool ->
string -> string list -> Biokepi_bfx_tools.Gatk.Configuration.Mutect2.t
val to_json :
Biokepi_bfx_tools.Gatk.Configuration.Mutect2.t -> Yojson.Basic.json
val default : Biokepi_bfx_tools.Gatk.Configuration.Mutect2.t
val default_without_cosmic : Biokepi_bfx_tools.Gatk.Configuration.Mutect2.t
val compile :
reference:Biokepi_run_environment.Reference_genome.t ->
Biokepi_bfx_tools.Gatk.Configuration.Mutect2.t ->
[> `Arguments of string list ] *
[> `Edges of Biokepi_run_environment.Common.KEDSL.workflow_edge list ]
val name : Biokepi_bfx_tools.Gatk.Configuration.Mutect2.t -> string
end