sig
module Remove = Biokepi_run_environment.Workflow_utilities.Remove
module Configuration :
sig
type t = { name : string; use_reference_gtf : bool; }
val to_json :
Biokepi_bfx_tools.Stringtie.Configuration.t -> Yojson.Basic.json
val default : Biokepi_bfx_tools.Stringtie.Configuration.t
end
val run :
configuration:Biokepi_bfx_tools.Stringtie.Configuration.t ->
run_with:Biokepi_run_environment.Machine.t ->
bam:Biokepi_run_environment.Common.KEDSL.bam_file
Biokepi_run_environment.Common.KEDSL.workflow_node ->
result_prefix:string ->
unit ->
< exists : Ketrew_pure.Target.Condition.t;
host : Biokepi_run_environment.Common.KEDSL.Host.t;
is_bigger_than : int -> Ketrew_pure.Target.Condition.t;
is_done : Biokepi_run_environment.Common.KEDSL.Condition.t option;
path : string >
Biokepi_run_environment.Common.KEDSL.workflow_node
end