sig
type t = {
name : string;
rna_gene_fpkm_tracking_file : string option;
rna_min_gene_expression : float;
rna_transcript_fpkm_tracking_file : string option;
rna_min_transcript_expression : float;
rna_transcript_fkpm_gtf_file : string option;
mhc_epitope_lengths : int list;
only_novel_epitopes : bool;
ic50_cutoff : float;
percentile_cutoff : float;
padding_around_mutation : int option;
self_filter_directory : string option;
skip_variant_errors : bool;
parameters : (string * string) list;
}
val to_json :
Biokepi_bfx_tools.Topiary.Configuration.t -> Yojson.Basic.json
val render : Biokepi_bfx_tools.Topiary.Configuration.t -> string list
val default : Biokepi_bfx_tools.Topiary.Configuration.t
val name : Biokepi_bfx_tools.Topiary.Configuration.t -> string
end