Module Biokepi_bfx_tools.Sambamba (.ml)

module Sambamba: sig .. end

module Remove: Biokepi_run_environment.Workflow_utilities.Remove

module Filter: sig .. end

val view : run_with:Biokepi_run_environment.Machine.t ->
       bam:< is_done : Biokepi_run_environment.Common.KEDSL.Condition.t option;
             path : string; reference_build : string;
             sorting : [ `Coordinate | `Read_name ] option; .. >
           Biokepi_run_environment.Common.KEDSL.workflow_node ->
       filter:[< `String of string ] ->
       string ->
       < escaped_sample_name : string;
         host : Biokepi_run_environment.Common.KEDSL.Host.t;
         is_done : Biokepi_run_environment.Common.KEDSL.Condition.t option;
         path : string; reference_build : string; sample_name : string;
         sorting : [ `Coordinate | `Read_name ] option >
       Biokepi_run_environment.Common.KEDSL.workflow_node