Module Biokepi_pipeline_edsl.Pipeline_library.Input.Derive (.ml)

module Derive: sig .. end

val ensure_one_flowcell_max : string list ->
       (string list,
        [> `Multiple_flowcells of string list | `Re_group_error of string ])
       Pvem_lwt_unix.Deferred_result.t

val fastqs : ?paired_end:bool ->
       host:Ketrew_pure.Host.t ->
       string ->
       ((string option * Biokepi_pipeline_edsl.Pipeline_library.Input.fastq_data)
        list,
        [> `Host of
             [> `Execution of
                  < host : string; message : string; stderr : string option;
                    stdout : string option >
              | `Named_host_not_found of string
              | `Non_zero of string * int
              | `Ssh_failure of
                  [> `Wrong_log of string
                   | `Wrong_status of Ketrew.Unix_process.Exit_code.t ] *
                  string
              | `System of [> `Sleep of float ] * [> `Exn of exn ]
              | `Timeout of float
              | `Unix_exec of string ]
             Ketrew.Host_io.Error.execution Ketrew.Host_io.Error.non_zero_execution
         | `Multiple_flowcells of string list
         | `R2_expected_for_r1 of string
         | `Re_group_error of string ])
       Pvem_lwt_unix.Deferred_result.t