Module Ketrew.Lsf

module Lsf: sig .. end

Implementation of the LONG_RUNNING API with the LSF batch processing scheduler.

Implementation of the LONG_RUNNING API with the LSF batch processing scheduler.

“Long-running” plugin based on the LSF batch scheduler.

Shell commands are put in a Ketrew_pure.Monitored_script.t, and started with "bsub [OPTIONS] < <script>" (we gather the job-id while submitting).

The update function uses the log-file of the monitored-script, and the command "bjobs [OPTIONS] <job-ID>".

The kill function kills the job with "bkill <job-ID>".

include Long_running.LONG_RUNNING

The “standard” plugin API.

val create : ?host:Ketrew_pure.Host.t ->
       ?queue:string ->
       ?name:string ->
       ?wall_limit:string ->
       ?processors:[ `Min of int | `Min_max of int * int ] ->
       ?project:string ->
       ?request_memory:[ `GB of int | `MB of int ] ->
       ?raw_options:string list ->
       Ketrew_pure.Program.t -> [> `Long_running of string * string ]

Create a “long-running” Ketrew_pure.Target.build_process to run a Ketrew_pure.Program.t on a given LSF-enabled host (run parameters already serialized):

?queue is the name of the LSF queue requested ("-q" option).
?name is the job name ("-J" option).
?wall_limit is the job's Wall-time timeout ("-W" option).
?processors is the “processors” request ("-n" option).
?project is the job assigned “project” ("-P" option).